Pumpkin Muffin Pecan Pie Cups

Featured in: Sweet & Toasted Treats

Enjoy a seasonal treat that brings together soft pumpkin muffins and a generous layer of pecan pie topping, all baked in individual cups. The lightly spiced pumpkin base provides a moist foundation, balanced by aromatic cinnamon, ginger, and nutmeg. A sweet combination of chopped pecans, brown sugar, maple syrup, and melted butter crowns each cup, adding texture and richness. Quick to prepare and easy to serve, these desserts are perfect for gatherings or cozy nights at home. Serve warm for extra comfort, perhaps with a scoop of vanilla ice cream.

Updated on Mon, 27 Oct 2025 15:21:00 GMT
Moist pumpkin muffin pecan pie cups topped with crunchy pecans and maple syrup.  Save
Moist pumpkin muffin pecan pie cups topped with crunchy pecans and maple syrup. | smokyfeast.com

A delightful fusion dessert combining moist pumpkin muffins with a gooey pecan pie topping, baked in individual cups for the perfect autumn treat.

I first made these Pumpkin Muffin Pecan Pie Cups for a fall picnic, and everyone raved about the combination of the soft muffin base and crunchy, syrupy pecan topping. They came together easily and brought a festive touch to our family table.

Ingredients

  • All-purpose flour: 1 1/2 cups (190 g)
  • Baking powder: 1 tsp
  • Baking soda: 1/2 tsp
  • Salt: 1/2 tsp
  • Ground cinnamon: 1 tsp
  • Ground nutmeg: 1/2 tsp
  • Ground ginger: 1/2 tsp
  • Ground cloves: 1/4 tsp
  • Vegetable oil: 1/2 cup (120 ml)
  • Light brown sugar: 2/3 cup (130 g) for base, 1/3 cup (70 g) for topping
  • Eggs: 2 large for base, 1 large for topping
  • Canned pumpkin puree: 1 cup (225 g)
  • Pure vanilla extract: 1 tsp for base, 1/2 tsp for topping
  • Pecan halves, roughly chopped: 1 cup (120 g)
  • Pure maple syrup: 1/4 cup (60 ml)
  • Unsalted butter, melted: 2 tbsp
  • Pinch of salt: for topping

Instructions

Prepare muffin tin:
Preheat the oven to 350°F (175°C). Line a 12-cup muffin tin with paper liners or lightly grease.
Mix dry ingredients:
In a large bowl, whisk together flour, baking powder, baking soda, salt, cinnamon, nutmeg, ginger, and cloves.
Mix wet ingredients:
In a separate bowl, whisk oil, brown sugar, eggs, pumpkin puree, and vanilla until smooth.
Combine batter:
Add the wet ingredients to the dry ingredients, stirring gently until just combined. Do not overmix.
Fill muffin cups:
Divide the pumpkin batter evenly among the muffin cups, filling each about two-thirds full.
Make pecan topping:
In a medium bowl, combine pecans, brown sugar, maple syrup, melted butter, egg, vanilla, and salt for the topping. Mix until fully incorporated.
Top muffins:
Spoon 1 to 2 tablespoons of the pecan pie topping onto each muffin cup, gently spreading to cover the surface.
Bake:
Bake for 25 to 30 minutes, or until a toothpick inserted in the center of the muffin comes out clean (avoid poking into the pecan topping).
Cool:
Cool in the pan for 10 minutes, then transfer to a wire rack to cool completely.
Deliciously baked pumpkin muffin pecan pie cups, perfect for fall gatherings.  Save
Deliciously baked pumpkin muffin pecan pie cups, perfect for fall gatherings. | smokyfeast.com

These Pumpkin Muffin Pecan Pie Cups have become a seasonal tradition in our home, with little hands helping to sprinkle the pecans and everyone gathered in the kitchen as they bake.

Required Tools

12-cup muffin tin, mixing bowls, whisk, spatula, measuring cups and spoons, cooling rack

Allergen Information

Contains: Wheat (gluten), eggs, tree nuts (pecans), dairy (butter). To make dairy-free, use dairy-free butter.

Nutritional Information

Calories: 295, Total Fat: 17 g, Carbohydrates: 34 g, Protein: 4 g per serving.

Gooey pecan pie topping on fluffy pumpkin muffin cups, an autumn dessert delight. Save
Gooey pecan pie topping on fluffy pumpkin muffin cups, an autumn dessert delight. | smokyfeast.com

For best results, let the muffins cool completely before enjoying. These autumn treats add warmth and sweetness to any gathering.

Kitchen Questions

Can I substitute walnuts for pecans?

Yes, walnuts offer a similar texture and flavor, making them a great alternative for the topping.

How can I make this dairy-free?

Replace the butter in the topping with a dairy-free alternative. Always check ingredient labels for allergens.

Should the muffins be served warm or at room temperature?

They are delightful either way, but serving warm enhances their flavor and the gooey pecan topping.

Can I add extra spices to the muffin base?

Absolutely. A hint of orange zest or a sprinkle of cardamom can enhance the aromatic profile beautifully.

Is fresh pumpkin puree preferred over canned?

Canned pumpkin works well for convenience, but fresh puree will add depth and natural sweetness.

What’s the best way to store these dessert cups?

Keep in an airtight container at room temperature for up to two days, or refrigerate for longer freshness.

Pumpkin Muffin Pecan Pie Cups

Pumpkin muffins with pecan topping baked in cups, featuring warm spices and a sweet nutty finish.

Prep duration
20 min
Heat time
30 min
Complete duration
50 min
Created by Jackson Reed


Skill Level Easy

Heritage American

Output 12 Portions

Nutrition Labels Meat-Free

What You'll Need

Pumpkin Muffin Base

01 1 1/2 cups all-purpose flour
02 1 teaspoon baking powder
03 1/2 teaspoon baking soda
04 1/2 teaspoon salt
05 1 teaspoon ground cinnamon
06 1/2 teaspoon ground nutmeg
07 1/2 teaspoon ground ginger
08 1/4 teaspoon ground cloves
09 1/2 cup vegetable oil
10 2/3 cup light brown sugar
11 2 large eggs
12 1 cup canned pumpkin puree
13 1 teaspoon pure vanilla extract

Pecan Pie Topping

01 1 cup pecan halves, roughly chopped
02 1/3 cup light brown sugar
03 1/4 cup pure maple syrup
04 2 tablespoons unsalted butter, melted
05 1 large egg
06 1/2 teaspoon pure vanilla extract
07 Pinch of salt

Method

Phase 01

Preheat Oven: Preheat oven to 350°F. Arrange paper liners in a 12-cup muffin tin or lightly grease the cups.

Phase 02

Prepare Dry Ingredients: In a large mixing bowl, whisk together flour, baking powder, baking soda, salt, cinnamon, nutmeg, ginger, and cloves thoroughly.

Phase 03

Combine Wet Ingredients: In a separate bowl, whisk vegetable oil, light brown sugar, eggs, pumpkin puree, and vanilla extract until smooth and fully blended.

Phase 04

Mix Batter: Gently stir wet ingredients into the dry mixture until just combined, avoiding overmixing.

Phase 05

Fill Muffin Tin: Evenly distribute the pumpkin batter among muffin cups, filling each approximately two-thirds full.

Phase 06

Prepare Pecan Topping: In a medium bowl, mix chopped pecans, light brown sugar, maple syrup, melted butter, egg, vanilla extract, and a pinch of salt until fully incorporated.

Phase 07

Add Topping: Spoon 1 to 2 tablespoons of pecan topping onto each muffin, gently spreading to cover the surface.

Phase 08

Bake: Bake for 25 to 30 minutes, or until a toothpick inserted in the pumpkin portion comes out clean. Avoid testing through the pecan topping.

Phase 09

Cool: Allow to cool in the pan for 10 minutes, then carefully transfer muffins to a wire rack to cool completely before serving.

Kitchen Tools

  • 12-cup muffin tin
  • Mixing bowls
  • Whisk
  • Spatula
  • Measuring cups and spoons
  • Cooling rack

Allergy Details

Always review ingredients for potential allergens and seek professional medical guidance if unsure.
  • Contains wheat (gluten), eggs, tree nuts (pecans), and dairy (butter). Use dairy-free butter for a dairy-free alternative. Review all packaged ingredient labels for allergens.

Nutrition Details (per portion)

Values shown are estimates only - please consult healthcare providers for specific advice.
  • Energy: 295
  • Fats: 17 g
  • Carbohydrates: 34 g
  • Proteins: 4 g